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STRINGSTRING
XP_003678690.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003678690.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003678690.1Uncharacterized protein; Similar to Saccharomyces cerevisiae RRP8 (YDR083W); ancestral locus Anc_8.215 (399 aa)    
Predicted Functional Partners:
XP_003682720.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DBP3 (YGL078C); ancestral locus Anc_6.204; Belongs to the DEAD box helicase family (512 aa)
     
      0.981
XP_003679486.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae NOP4 (YPL043W); ancestral locus Anc_8.491 (692 aa)
     
 
  0.979
XP_003679589.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RPF2 (YKR081C); ancestral locus Anc_5.674 (351 aa)
     
      0.972
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (588 aa)
     
   
  0.957
XP_003680515.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae NOP2 (YNL061W); ancestral locus Anc_2.247; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (614 aa)
     
 
  0.940
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (829 aa)
     
 
  0.939
XP_003680482.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YIL096C; ancestral locus Anc_2.280 (322 aa)
     
   
  0.895
XP_003679057.1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (647 aa)
 
 
      0.884
XP_003682977.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DBP9 (YLR276C); ancestral locus Anc_6.73 (588 aa)
     
      0.863
XP_003679274.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae BUD23 (YCR047C); ancestral locus Anc_6.316 (270 aa)
     
   
  0.859
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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