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STRINGSTRING
XP_003679254.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003679254.1" - Autophagy-related protein 3 in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003679254.1Autophagy-related protein 3; Similar to Saccharomyces cerevisiae ATG3 (YNR007C); ancestral locus Anc_6.297 (305 aa)    
Predicted Functional Partners:
XP_003682668.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ATG7 (YHR171W); ancestral locus Anc_5.66 (626 aa)
     
 
  0.999
XP_003680247.1
Autophagy-related protein; Similar to Saccharomyces cerevisiae ATG8 (YBL078C); ancestral locus Anc_7.400; Belongs to the ATG8 family (118 aa)
     
  0.996
XP_003679155.1
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (296 aa)
     
  0.996
XP_003682935.1
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagic vesicle formation, mitophagy, and nucleophagy (209 aa)
     
  0.995
XP_003682862.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ATG16 (YMR159C); ancestral locus Anc_2.354 (132 aa)
       
  0.985
XP_003681507.1
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy (460 aa)
     
 
  0.973
XP_003681024.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ATG18 (YFR021W); ancestral locus Anc_1.359 (533 aa)
     
 
  0.962
XP_003679104.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae VPS30 (YPL120W); ancestral locus Anc_8.615 (494 aa)
     
 
  0.958
XP_003679810.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ATG1 (YGL180W); ancestral locus Anc_8.141 (886 aa)
     
 
  0.952
XP_003680318.1
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (926 aa)
     
   
  0.932
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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