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STRINGSTRING
XP_003679268.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003679268.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003679268.1Uncharacterized protein; Similar to Saccharomyces cerevisiae SMM1 (YNR015W); ancestral locus Anc_6.310 (372 aa)    
Predicted Functional Partners:
XP_003682423.1
tRNA (guanine(26)-N(2))-dimethyltransferase; Similar to Saccharomyces cerevisiae TRM1 (YDR120C); ancestral locus Anc_8.274 (546 aa)
     
 
  0.837
XP_003681015.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YHR020W; ancestral locus Anc_1.352 (674 aa)
     
 
  0.793
XP_003679724.1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 (415 aa)
   
 
  0.781
XP_003681432.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae GUS1 (YGL245W); ancestral locus Anc_3.569; Belongs to the class-I aminoacyl-tRNA synthetase family (706 aa)
   
 
  0.780
XP_003680881.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ITT1 (YML068W); ancestral locus Anc_4.332 (458 aa)
       
 
  0.777
TRM5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (493 aa)
     
   
  0.776
XP_003683181.1
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)- methyltransferase, which catalyzes the formation of N(1)- methyladenine at position 58 (m1A58) in initiator methionyl-tRNA (379 aa)
   
   
  0.660
XP_003682833.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TRM3 (YDL112W); ancestral locus Anc_2.325 (1394 aa)
   
   
  0.646
XP_003681416.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TAN1 (YGL232W); ancestral locus Anc_3.553 (285 aa)
     
      0.628
XP_003681989.1
tRNA pseudouridine synthase; Similar to Saccharomyces cerevisiae PUS2 (YGL063W) and PUS1 (YPL212C); ancestral locus Anc_6.226 (431 aa)
     
 
  0.617
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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