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STRINGSTRING
XP_003679308.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003679308.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003679308.1Uncharacterized protein; Similar to Saccharomyces cerevisiae PAT1 (YCR077C); ancestral locus Anc_6.350 (832 aa)    
Predicted Functional Partners:
XP_003683182.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM1 (YJL124C); ancestral locus Anc_1.230 (165 aa)
       
 
  0.996
XP_003680894.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM3 (YLR438C-A); ancestral locus Anc_4.319 (85 aa)
       
 
  0.995
XP_003680370.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM4 (YER112W); ancestral locus Anc_7.410 (175 aa)
     
 
  0.993
XP_003679776.1
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3’-terminal U-tract of U6 snRNA (93 aa)
       
 
  0.991
XP_003679823.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM7 (YNL147W); ancestral locus Anc_2.119 (117 aa)
       
 
  0.987
XP_003681044.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM6 (YDR378C); ancestral locus Anc_5.452 (82 aa)
       
      0.986
XP_003679758.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM5 (YER146W); ancestral locus Anc_8.192 (85 aa)
       
      0.986
XP_003679857.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DCP2 (YNL118C); ancestral locus Anc_2.155 (760 aa)
     
 
  0.980
XP_003680310.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DHH1 (YDL160C); ancestral locus Anc_7.336; Belongs to the DEAD box helicase family (479 aa)
     
 
  0.944
XP_003682129.1
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1471 aa)
     
 
  0.915
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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