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STRINGSTRING
XP_003679731.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003679731.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003679731.1Uncharacterized protein; Similar to Saccharomyces cerevisiae LSG1 (YGL099W); ancestral locus Anc_6.163 (646 aa)    
Predicted Functional Partners:
XP_003682669.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (517 aa)
     
 
  0.999
XP_003682394.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ARX1 (YDR101C); ancestral locus Anc_8.245 (574 aa)
     
 
  0.983
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family (245 aa)
     
 
  0.963
XP_003679057.1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (647 aa)
     
 
  0.930
XP_003680980.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae REI1 (YBR267W); ancestral locus Anc_1.316 (386 aa)
     
 
  0.927
XP_003681849.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RLP24 (YLR009W); ancestral locus Anc_5.233 (197 aa)
     
 
  0.922
XP_003681397.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae ARB1 (YER036C); ancestral locus Anc_3.534 (610 aa)
     
 
  0.908
XP_003682683.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SDA1 (YGR245C); ancestral locus Anc_5.81 (737 aa)
     
 
  0.900
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (451 aa)
     
 
  0.897
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (798 aa)
     
 
  0.882
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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