• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
XP_003679848.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003679848.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003679848.1Uncharacterized protein; Similar to Saccharomyces cerevisiae NAF1 (YNL124W); ancestral locus Anc_2.146 (456 aa)    
Predicted Functional Partners:
XP_003679510.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae NHP2 (YDL208W); ancestral locus Anc_8.465 (151 aa)
     
 
  0.954
XP_003680491.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SHQ1 (YIL104C); ancestral locus Anc_2.271 (492 aa)
     
 
  0.925
XP_003681728.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae NOP10 (YHR072W-A); ancestral locus Anc_5.353 (58 aa)
     
 
  0.908
XP_003679935.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae CBF5 (YLR175W); ancestral locus Anc_1.397 (477 aa)
     
 
  0.891
XP_003681530.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PUS4 (YNL292W); ancestral locus Anc_3.67 (396 aa)
     
 
  0.857
XP_003679861.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YNL115C; ancestral locus Anc_2.158 (646 aa)
           
  0.748
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (829 aa)
     
        0.741
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (588 aa)
     
      0.739
XP_003682683.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SDA1 (YGR245C); ancestral locus Anc_5.81 (737 aa)
     
        0.739
XP_003681693.1
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (207 aa)
     
 
  0.736
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
Server load: low (11%) [HD]