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STRINGSTRING
XP_003680336.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003680336.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
XP_003680336.1Uncharacterized protein; Similar to Saccharomyces cerevisiae SEC31 (YDL195W); ancestral locus Anc_7.310 (1264 aa)    
Predicted Functional Partners:
XP_003683104.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SEC23 (YPR181C); ancestral locus Anc_7.537 (757 aa)
     
  0.998
XP_003680308.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SEC13 (YLR208W); ancestral locus Anc_7.338; Belongs to the WD repeat SEC13 family (294 aa)
     
  0.996
XP_003680499.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SEC24 (YIL109C) and SFB2 (YNL049C); ancestral locus Anc_2.262 (906 aa)
     
  0.996
XP_003681678.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SFB3 (YHR098C); ancestral locus Anc_5.400 (922 aa)
     
  0.995
XP_003681998.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SAR1 (YPL218W); ancestral locus Anc_6.235; Belongs to the small GTPase superfamily. SAR1 family (189 aa)
     
  0.993
XP_003679049.1
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy (2237 aa)
     
 
  0.985
XP_003681624.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PEF1 (YGR058W); ancestral locus Anc_4.203 (326 aa)
       
 
  0.946
XP_003681378.1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1619 aa)
     
   
  0.908
XP_003682002.1
Coatomer subunit beta’; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (881 aa)
     
   
  0.854
XP_003680324.1
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1201 aa)
     
   
  0.826
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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