STRINGSTRING
XP_003680516.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003680516.1" - Hypothetical protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003680516.1Hypothetical protein (429 aa)    
Predicted Functional Partners:
XP_003683181.1
Hypothetical protein (379 aa)
     
  0.994
YTM1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (451 aa)
     
        0.940
XP_003681602.1
Hypothetical protein (270 aa)
     
 
  0.849
TRM8
Hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (286 aa)
     
 
  0.841
XP_003682423.1
Hypothetical protein (546 aa)
     
 
  0.820
TRM82
Hypothetical protein; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit (432 aa)
     
  0.811
XP_003679589.1
Hypothetical protein (351 aa)
     
      0.805
XP_003679541.1
Hypothetical protein (805 aa)
     
        0.800
XP_003681716.1
Hypothetical protein (745 aa)
     
        0.799
XP_003679838.1
Hypothetical protein (1039 aa)
     
        0.796
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora, Torulaspora delbrueckii
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