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STRINGSTRING
XP_003680541.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003680541.1" - Ribonuclease in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
XP_003680541.1Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (299 aa)    
Predicted Functional Partners:
XP_003681793.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RNH202 (YDR279W); ancestral locus Anc_5.288 (343 aa)
       
 
  0.940
XP_003680708.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae POL2 (YNL262W); ancestral locus Anc_1.94 (2211 aa)
     
 
  0.932
XP_003679684.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RNH1 (YMR234W); ancestral locus Anc_8.766 (392 aa)
   
 
  0.908
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (380 aa)
   
 
  0.896
XP_003682859.1
DNA polymerase; Similar to Saccharomyces cerevisiae POL3 (YDL102W); ancestral locus Anc_2.351 (1094 aa)
     
 
  0.881
XP_003680574.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (258 aa)
     
 
  0.866
XP_003683344.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DUT1 (YBR252W); ancestral locus Anc_7.173 (146 aa)
   
   
  0.833
XP_003683354.1
DNA primase; Similar to Saccharomyces cerevisiae PRI1 (YIR008C); ancestral locus Anc_7.171; Belongs to the eukaryotic-type primase small subunit family (416 aa)
     
   
  0.823
XP_003683015.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TOP1 (YOL006C); ancestral locus Anc_6.32 (760 aa)
       
 
  0.794
XP_003679585.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae CDC21 (YOR074C); ancestral locus Anc_5.678 (308 aa)
   
   
  0.786
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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