• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
XP_003680689.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003680689.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003680689.1Uncharacterized protein; Similar to Saccharomyces cerevisiae RPA49 (YNL248C); ancestral locus Anc_1.112 (413 aa)    
Predicted Functional Partners:
XP_003679887.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1196 aa)
     
 
  0.999
XP_003683151.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RPA34 (YJL148W); ancestral locus Anc_1.201 (214 aa)
     
 
  0.999
XP_003683470.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1665 aa)
     
 
  0.999
XP_003683469.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RPA43 (YOR340C); ancestral locus Anc_7.52 (306 aa)
     
 
  0.999
XP_003682071.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (125 aa)
     
 
  0.998
XP_003679451.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae NOP58 (YOR310C); ancestral locus Anc_8.787 (504 aa)
     
 
  0.997
XP_003682912.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RRB1 (YMR131C); ancestral locus Anc_2.401 (514 aa)
     
      0.992
XP_003682643.1
RNA helicase; Similar to Saccharomyces cerevisiae HAS1 (YMR290C); ancestral locus Anc_5.40 (485 aa)
     
      0.990
XP_003681334.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PUF6 (YDR496C); ancestral locus Anc_3.85 (648 aa)
     
        0.986
XP_003682720.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DBP3 (YGL078C); ancestral locus Anc_6.204; Belongs to the DEAD box helicase family (512 aa)
     
      0.985
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
Server load: low (8%) [HD]