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STRINGSTRING
XP_003680892.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003680892.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003680892.1Uncharacterized protein; Similar to Saccharomyces cerevisiae OGG1 (YML060W); ancestral locus Anc_4.321 (387 aa)    
Predicted Functional Partners:
XP_003678777.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae APN1 (YKL114C); ancestral locus Anc_2.458 (356 aa)
     
 
  0.913
XP_003679786.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae APN2 (YBL019W); ancestral locus Anc_8.165 (522 aa)
   
 
  0.862
UNG1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (347 aa)
     
   
  0.852
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (380 aa)
   
 
  0.817
XP_003678672.1
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (1225 aa)
     
 
  0.813
XP_003679330.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae MSH3 (YCR092C); ancestral locus Anc_6.372 (995 aa)
     
 
  0.804
NTG1
Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family (406 aa)
     
 
  0.794
XP_003681219.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RAD57 (YDR004W); ancestral locus Anc_3.198 (461 aa)
     
 
  0.782
XP_003681312.1
Uncharacterized protein; Component of the post-replicative DNA mismatch repair system (MMR) (962 aa)
     
 
  0.778
XP_003679383.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RAD10 (YML095C); ancestral locus Anc_8.874 (205 aa)
     
   
  0.771
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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