STRINGSTRING
XP_003680892.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003680892.1" - Hypothetical protein in Torulaspora delbrueckii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003680892.1Hypothetical protein (387 aa)    
Predicted Functional Partners:
XP_003679786.1
Hypothetical protein (522 aa)
   
  0.852
XP_003678778.1
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (380 aa)
   
 
  0.612
XP_003680574.1
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (258 aa)
       
 
  0.602
NTG1
Hypothetical protein; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (406 aa)
       
 
  0.584
XP_003678672.1
Hypothetical protein; Component of the post-replicative DNA mismatch repair system (MMR) (1225 aa)
   
 
  0.578
XP_003681219.1
Hypothetical protein (461 aa)
     
 
  0.573
XP_003678930.1
Hypothetical protein (637 aa)
       
 
  0.567
XP_003678994.1
Hypothetical protein (782 aa)
     
 
  0.561
XP_003678777.1
Hypothetical protein (356 aa)
       
 
  0.559
XP_003682653.1
Hypothetical protein (1012 aa)
   
 
  0.559
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora, Torulaspora delbrueckii
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