XP_003680982.1 protein (Torulaspora delbrueckii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

XP_003680982.1

Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL37 (YBR268W); ancestral locus Anc_1.318 (100 aa)

Predicted Functional Partners:

XP_003678905.1

0.966

XP_003679310.1

0.928

XP_003680966.1

0.926

XP_003678827.1

0.916

XP_003679948.1

0.889

XP_003680977.1

0.885

XP_003680893.1

0.867

XP_003681342.1

0.821

XP_003681301.1

0.817

XP_003678992.1

0.814

Your Current Organism:

Torulaspora delbrueckii

NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but resolution at 400 dpi

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as simple tabular text output:

download

TSV: tab separated values - can be opened in Excel

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

page 1 of 6

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2018

Credits

Access

Info

About

node1	node2	node1 annotation	node2 annotation	score
XP_003678827.1	XP_003678905.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	0.888
XP_003678827.1	XP_003678992.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL28 (YDR462W); ancestral locus Anc_5.584	0.738
XP_003678827.1	XP_003679310.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae YNR036C; ancestral locus Anc_6.352; Belongs to the universal ribosomal protein uS12 family	0.924
XP_003678827.1	XP_003679948.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP7 (YNL005C); ancestral locus Anc_1.410	0.919
XP_003678827.1	XP_003680893.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL4 (YLR439W); ancestral locus Anc_4.320	0.756
XP_003678827.1	XP_003680966.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL27 (YBR282W); ancestral locus Anc_1.304	0.753
XP_003678827.1	XP_003680977.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL8 (YJL063C); ancestral locus Anc_1.313; Belongs to the bacterial ribosomal protein bL17 family	0.954
XP_003678827.1	XP_003680982.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL37 (YBR268W); ancestral locus Anc_1.318	0.916
XP_003678827.1	XP_003681301.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS9 (YBR146W); ancestral locus Anc_3.117; Belongs to the universal ribosomal protein uS9 family	0.950
XP_003678827.1	XP_003681342.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL10 (YNL284C); ancestral locus Anc_3.77	0.940
XP_003678905.1	XP_003678827.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP17 (YKL003C); ancestral locus Anc_2.508	0.888
XP_003678905.1	XP_003678992.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL28 (YDR462W); ancestral locus Anc_5.584	0.824
XP_003678905.1	XP_003679310.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae YNR036C; ancestral locus Anc_6.352; Belongs to the universal ribosomal protein uS12 family	0.976
XP_003678905.1	XP_003679948.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP7 (YNL005C); ancestral locus Anc_1.410	0.914
XP_003678905.1	XP_003680893.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL4 (YLR439W); ancestral locus Anc_4.320	0.962
XP_003678905.1	XP_003680966.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL27 (YBR282W); ancestral locus Anc_1.304	0.942
XP_003678905.1	XP_003680977.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL8 (YJL063C); ancestral locus Anc_1.313; Belongs to the bacterial ribosomal protein bL17 family	0.898
XP_003678905.1	XP_003680982.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL37 (YBR268W); ancestral locus Anc_1.318	0.966
XP_003678905.1	XP_003681301.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPS9 (YBR146W); ancestral locus Anc_3.117; Belongs to the universal ribosomal protein uS9 family	0.953
XP_003678905.1	XP_003681342.1	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRP20 (YDR405W); ancestral locus Anc_5.498	Uncharacterized protein; Similar to Saccharomyces cerevisiae MRPL10 (YNL284C); ancestral locus Anc_3.77	0.969