STRINGSTRING
XP_003681292.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003681292.1" - Hypothetical protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003681292.1Hypothetical protein (281 aa)    
Predicted Functional Partners:
PAN3
Hypothetical protein; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by poly(A)-binding protein PAB1, which is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome- mediated 3’-5’ exonucleolytic degradation, or deadenlyation- dependent mRNA decaping and subsequent 5’-3’ exonucleolytic degradation by XRN1 [...] (665 aa)
     
  0.902
XP_003680574.1
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (258 aa)
     
  0.888
XP_003680538.1
Hypothetical protein (288 aa)
     
        0.770
XP_003681700.1
Hypothetical protein (331 aa)
     
 
  0.760
XP_003679486.1
Hypothetical protein (692 aa)
     
      0.730
XP_003679687.1
Hypothetical protein (206 aa)
     
      0.708
XP_003678817.1
mRNA turnover protein MRT4 (238 aa)
     
 
  0.700
YTM1
Hypothetical protein; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (451 aa)
     
        0.699
XP_003679939.1
Hypothetical protein (315 aa)
     
    0.694
XP_003681742.1
Hypothetical protein (445 aa)
     
 
  0.694
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora, Torulaspora delbrueckii
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