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STRINGSTRING
XP_003681563.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003681563.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003681563.1Uncharacterized protein; Similar to Saccharomyces cerevisiae SKI2 (YLR398C); ancestral locus Anc_4.261 (1257 aa)    
Predicted Functional Partners:
XP_003683095.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SKI3 (YPR189W); ancestral locus Anc_7.546 (1397 aa)
     
 
  0.985
XP_003681389.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SKI8 (YGL213C); ancestral locus Anc_3.526 (430 aa)
     
 
  0.980
XP_003682129.1
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1471 aa)
     
 
  0.898
XP_003681500.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae CSL4 (YNL232W); ancestral locus Anc_2.11 (287 aa)
     
 
  0.870
XP_003679928.1
Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (395 aa)
     
 
  0.858
XP_003681938.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SKI6 (YGR195W); ancestral locus Anc_5.146 (246 aa)
     
 
  0.856
XP_003683022.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RRP6 (YOR001W); ancestral locus Anc_6.25 (735 aa)
     
 
  0.854
XP_003681033.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DIS3 (YOL021C); ancestral locus Anc_1.367; Belongs to the RNR ribonuclease family (997 aa)
     
 
  0.842
XP_003679583.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae HBS1 (YKR084C) and SKI7 (YOR076C); ancestral locus Anc_5.680 (731 aa)
     
 
  0.826
XP_003682231.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae MAK21 (YDR060W); ancestral locus Anc_3.309 (1010 aa)
     
 
  0.820
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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