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STRINGSTRING
XP_003681885.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003681885.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003681885.1Uncharacterized protein; Similar to Saccharomyces cerevisiae SDO1 (YLR022C); ancestral locus Anc_5.198 (240 aa)    
Predicted Functional Partners:
XP_003682102.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RIA1 (YNL163C); ancestral locus Anc_2.92 (1090 aa)
   
 
  0.960
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family (245 aa)
   
 
  0.931
XP_003681697.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YHR087W; ancestral locus Anc_5.384 (108 aa)
           
  0.925
XP_003681988.1
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (181 aa)
     
 
  0.820
XP_003678874.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae EFT2 (YDR385W) and EFT1 (YOR133W); ancestral locus Anc_5.467 (842 aa)
     
 
  0.785
XP_003682669.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (517 aa)
     
 
  0.775
XP_003679731.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSG1 (YGL099W); ancestral locus Anc_6.163 (646 aa)
     
 
  0.770
XP_003680980.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae REI1 (YBR267W); ancestral locus Anc_1.316 (386 aa)
     
 
  0.710
XP_003681515.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RPS19B (YNL302C) and RPS19A (YOL121C); ancestral locus Anc_3.51 (144 aa)
           
  0.690
XP_003682323.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RPS14A (YCR031C) and RPS14B (YJL191W); ancestral locus Anc_1.146; Belongs to the universal ribosomal protein uS11 family (138 aa)
           
  0.688
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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