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STRINGSTRING
XP_003681983.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003681983.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
XP_003681983.1Uncharacterized protein; Similar to Saccharomyces cerevisiae TYW1 (YPL207W); ancestral locus Anc_6.220 (761 aa)    
Predicted Functional Partners:
XP_003682018.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TYW3 (YGL050W); ancestral locus Anc_4.55 (239 aa)
   
   
  0.957
XP_003682810.1
tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3’-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha- carboxypropyl (acp) group from S-adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (407 aa)
     
   
  0.927
XP_003678577.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PPM2 (YOL141W); ancestral locus Anc_3.15 (677 aa)
     
   
  0.918
XP_003683405.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YAP5 (YIR018W) and YAP7 (YOL028C); ancestral locus Anc_7.115 (345 aa)
           
  0.918
TRM5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (493 aa)
     
   
  0.911
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (798 aa)
     
   
  0.721
XP_003682669.1
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit (517 aa)
     
   
  0.691
XP_003679108.1
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1142 aa)
     
        0.679
XP_003679539.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae CCC1 (YLR220W); ancestral locus Anc_8.437 (319 aa)
       
 
  0.667
XP_003681875.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DRS1 (YLL008W); ancestral locus Anc_5.208; Belongs to the DEAD box helicase family (740 aa)
     
      0.664
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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