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STRINGSTRING
XP_003682018.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003682018.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003682018.1Uncharacterized protein; Similar to Saccharomyces cerevisiae TYW3 (YGL050W); ancestral locus Anc_4.55 (239 aa)    
Predicted Functional Partners:
XP_003681983.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TYW1 (YPL207W); ancestral locus Anc_6.220 (761 aa)
   
   
  0.957
XP_003682810.1
tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3’-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha- carboxypropyl (acp) group from S-adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86 (407 aa)
       
  0.944
TRM5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family (493 aa)
   
   
  0.930
XP_003678577.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PPM2 (YOL141W); ancestral locus Anc_3.15 (677 aa)
           
  0.923
XP_003679297.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae IMG2 (YCR071C); ancestral locus Anc_6.339 (145 aa)
           
  0.746
XP_003681114.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TAD3 (YLR316C); ancestral locus Anc_4.133 (322 aa)
     
   
  0.612
XP_003683166.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TRM2 (YKR056W); ancestral locus Anc_1.214; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (556 aa)
           
  0.606
XP_003678953.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PPM1 (YDR435C); ancestral locus Anc_5.547 (328 aa)
           
  0.579
XP_003681842.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae TAD2 (YJL035C); ancestral locus Anc_5.238 (240 aa)
     
   
  0.573
XP_003679197.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae GCD1 (YOR260W); ancestral locus Anc_8.709 (504 aa)
           
  0.497
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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