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STRINGSTRING
XP_003682196.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003682196.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003682196.1Uncharacterized protein; Similar to Saccharomyces cerevisiae YPL183C; ancestral locus Anc_6.177 (1004 aa)    
Predicted Functional Partners:
TRM7
Putative tRNA (cytidine(32)/guanosine(34)-2’-O)-methyltransferase; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (299 aa)
     
 
  0.954
XP_003679426.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YMR259C; ancestral locus Anc_8.811 (1419 aa)
     
 
  0.949
XP_003679732.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YBR246W; ancestral locus Anc_6.162 (378 aa)
       
 
  0.922
XP_003682495.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YLR143W; ancestral locus Anc_8.349 (694 aa)
           
  0.921
XP_003679057.1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (647 aa)
     
        0.730
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (829 aa)
     
 
  0.717
XP_003679283.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PWP2 (YCR057C); ancestral locus Anc_6.325 (901 aa)
     
     
0.696
XP_003680207.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RRP12 (YPL012W); ancestral locus Anc_8.78 (1219 aa)
     
        0.649
XP_003679541.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae UTP13 (YLR222C); ancestral locus Anc_8.435 (805 aa)
     
     
0.626
XP_003679106.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae NOC2 (YOR206W); ancestral locus Anc_8.617 (712 aa)
     
        0.614
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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