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STRINGSTRING
XP_003682371.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003682371.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003682371.1Uncharacterized protein; Similar to Saccharomyces cerevisiae SCD6 (YPR129W); ancestral locus Anc_3.464 (314 aa)    
Predicted Functional Partners:
XP_003680310.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DHH1 (YDL160C); ancestral locus Anc_7.336; Belongs to the DEAD box helicase family (479 aa)
     
 
  0.986
XP_003679857.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DCP2 (YNL118C); ancestral locus Anc_2.155 (760 aa)
     
 
  0.946
XP_003679901.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae EDC3 (YEL015W); ancestral locus Anc_1.442 (521 aa)
     
 
  0.935
XP_003683182.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae LSM1 (YJL124C); ancestral locus Anc_1.230 (165 aa)
           
  0.845
XP_003682129.1
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1471 aa)
     
   
  0.836
XP_003679308.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PAT1 (YCR077C); ancestral locus Anc_6.350 (832 aa)
     
 
  0.835
XP_003678563.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae DCP1 (YOL149W); ancestral locus Anc_3.1 (203 aa)
     
 
  0.835
XP_003678582.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae CDC33 (YOL139C); ancestral locus Anc_3.20; Belongs to the eukaryotic initiation factor 4E family (211 aa)
     
 
  0.831
XP_003678678.1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (588 aa)
     
 
  0.796
XP_003681887.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae PUF3 (YLL013C); ancestral locus Anc_5.196 (589 aa)
     
 
  0.773
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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