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STRINGSTRING
XP_003682741.1 protein (Torulaspora delbrueckii) - STRING interaction network
"XP_003682741.1" - Uncharacterized protein in Torulaspora delbrueckii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_003682741.1Uncharacterized protein; Similar to Saccharomyces cerevisiae LIF1 (YGL090W); ancestral locus Anc_6.182 (389 aa)    
Predicted Functional Partners:
XP_003683029.1
DNA ligase; Similar to Saccharomyces cerevisiae DNL4 (YOR005C); ancestral locus Anc_6.18 (969 aa)
       
 
  0.980
XP_003679358.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YKU70 (YMR284W); ancestral locus Anc_8.849 (582 aa)
       
 
  0.936
XP_003678762.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae YKU80 (YMR106C); ancestral locus Anc_2.444 (626 aa)
       
 
  0.920
XP_003679914.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae POL4 (YCR014C); ancestral locus Anc_1.429 (578 aa)
           
  0.850
XP_003681644.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae XRS2 (YDR369C); ancestral locus Anc_5.435 (762 aa)
       
 
  0.766
XP_003680304.1
DNA ligase; Similar to Saccharomyces cerevisiae CDC9 (YDL164C); ancestral locus Anc_7.343 (705 aa)
       
 
  0.751
XP_003679705.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae MRE11 (YMR224C); ancestral locus Anc_8.744; Belongs to the MRE11/RAD32 family (668 aa)
           
  0.686
XP_003680912.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae SPP382 (YLR424W); ancestral locus Anc_4.301 (668 aa)
       
 
  0.653
XP_003678983.1
Uncharacterized protein; Similar to Saccharomyces cerevisiae RAD52 (YML032C); ancestral locus Anc_5.575 (432 aa)
           
  0.597
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (380 aa)
           
  0.485
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 4950
Other names: Candida colliculosa, Saccharomyces delbrueckii, Saccharomyces fermentati, Saccharomyces rosei, T. delbrueckii, Torulaspora delbrueckii, Torulaspora sp. R3DFM2, WM 821
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