STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TDEL0G02160Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (714 aa)    
Predicted Functional Partners:
TDEL0H00360
Uncharacterized protein.
    
 
 0.989
TDEL0E03150
Uncharacterized protein.
    
 
 0.986
TDEL0D00320
Response regulatory domain-containing protein.
    
 0.969
TDEL0E03660
Nsp1_C domain-containing protein.
     
 0.965
TDEL0D01280
GATA-type domain-containing protein.
   
 0.956
TDEL0A00270
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
0.808
TDEL0H01560
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.709
TDEL0A06280
Uncharacterized protein.
    
 
 0.686
TDEL0D04140
Histone H2A; Belongs to the histone H2A family.
    
 0.670
TDEL0D02880
RanBD1 domain-containing protein.
   
 0.668
Your Current Organism:
Torulaspora delbrueckii
NCBI taxonomy Id: 1076872
Other names: T. delbrueckii CBS 1146, Torulaspora delbrueckii CBS 1146
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