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CAG83247 protein (Yarrowia lipolytica) - STRING interaction network
"CAG83247" - Uncharacterized protein in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAG83247Uncharacterized protein; YALI0B16896p; Belongs to the DEAD box helicase family (753 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (590 aa)
     
  0.996
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (850 aa)
     
  0.996
CAG81531
Uncharacterized protein; YALI0D26620p (1257 aa)
     
 
  0.995
CAG83191
Uncharacterized protein; YALI0B15642p (731 aa)
     
 
  0.994
CAG82580
Uncharacterized protein; YALI0B00946p (515 aa)
   
 
  0.993
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (820 aa)
     
  0.993
CAG83649
Uncharacterized protein; YALI0A03509p (701 aa)
     
 
  0.993
CAG81435
Uncharacterized protein; YALI0D24497p (926 aa)
   
 
0.993
CAG78341
Uncharacterized protein; YALI0F17358p (653 aa)
     
 
  0.993
CAG81118
Uncharacterized protein; YALI0D17116p (510 aa)
   
 
  0.992
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: ATCC 18942, CBS 6124, Candida lipolytica, DBVPG 6053, Endomycopsis lipolytica, JCM 2320, Mycotorula lipolytica, NRRL YB-423, Y. lipolytica, Yarrowia lipolytica
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