STRINGSTRING
XP_002143102.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_002143102.1" - YALI0F03630p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_002143102.1YALI0F03630p (643 aa)    
Predicted Functional Partners:
TFB2
YALI0F30173p; Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA (467 aa)
           
  0.469
XP_505216.1
YALI0F09625p (241 aa)
           
  0.469
XP_502624.1
YALI0D09647p (800 aa)
           
  0.469
XP_502616.2
YALI0D09361p (779 aa)
           
  0.469
XP_500061.1
YALI0A14542p (647 aa)
           
  0.469
XP_504480.1
YALI0E27742p (281 aa)
           
  0.442
XP_505556.1
YALI0F17886p (697 aa)
           
  0.430
XP_503074.1
YALI0D20482p (238 aa)
           
  0.430
XP_502148.1
YALI0C22682p (634 aa)
           
  0.430
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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