STRINGSTRING
XP_499736.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_499736.1" - YALI0A03773p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_499736.1YALI0A03773p (330 aa)    
Predicted Functional Partners:
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.963
XP_505404.1
YALI0F14245p (275 aa)
     
 
  0.919
XP_506031.1
YALI0F30019p (1317 aa)
   
 
  0.901
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
  0.853
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
   
  0.852
DRS1
YALI0B16896p; ATP-binding RNA helicase involved in ribosome assembly (753 aa)
   
  0.830
HAS1
YALI0E01782p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (605 aa)
   
  0.812
DBP4
YALI0A20328p; ATP-dependent RNA helicase required for ribosome biogenesis. Involved in the release of U14 snoRNA in pre-ribosomal complexes. Required for pre-rRNA cleavage at site A2 (By similarity) (740 aa)
   
  0.810
XP_506090.1
mRNA turnover protein MRT4 (233 aa)
     
  0.797
DBP2
YALI0E27715p; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing (552 aa)
   
  0.777
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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