STRINGSTRING
XP_499788.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_499788.1" - YALI0A05555p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_499788.1YALI0A05555p (365 aa)    
Predicted Functional Partners:
XP_500295.1
YALI0A20614p (493 aa)
     
  0.991
XP_502109.1
YALI0C21846p (1117 aa)
     
  0.982
XP_503424.1
YALI0E01628p (499 aa)
     
 
  0.976
XP_505656.1
YALI0F20284p (530 aa)
     
    0.975
IMP4
YALI0D23859p; Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing (By similarity) (283 aa)
     
 
  0.973
XP_501306.1
YALI0C00913p (912 aa)
     
 
  0.973
YTM1
YALI0B12320p; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (511 aa)
     
 
  0.961
XP_505171.1
YALI0F08657p (687 aa)
     
  0.960
XP_500372.1
YALI0B01078p (906 aa)
     
  0.958
XP_500703.1
YALI0B10065p; Involved in nucleolar processing of pre-18S ribosomal RNA (641 aa)
     
  0.951
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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