STRINGSTRING
XP_499933.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_499933.1" - YALI0A10164p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_499933.1YALI0A10164p (454 aa)    
Predicted Functional Partners:
XP_505962.1
YALI0F27775p (1182 aa)
       
 
  0.951
XP_505949.1
YALI0F27489p (472 aa)
       
 
  0.691
XP_503115.1
YALI0D21530p (526 aa)
     
      0.630
XP_500290.1
YALI0A20518p (196 aa)
       
 
  0.499
XP_505237.1
YALI0F10153p (410 aa)
     
      0.473
SUS1
YALI0F26136p; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex required for deubiquitination of H2B and for the maintenance o [...] (91 aa)
       
 
  0.460
XP_503948.1
YALI0E14619p (143 aa)
     
      0.458
XP_504062.1
YALI0E17413p; Plays a role in vesicular protein sorting (848 aa)
       
      0.447
SUB2
YALI0A11157p; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity) (441 aa)
     
 
  0.407
XP_502350.2
YALI0D02995p (190 aa)
       
      0.403
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (5%) [HD]