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SUB2 protein (Yarrowia lipolytica) - STRING interaction network
"SUB2" - YALI0A11157p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
SUB2YALI0A11157p; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity) (441 aa)    
Predicted Functional Partners:
XP_002142994.1
YALI0A20867p (223 aa)
     
  0.993
XP_505140.1
YALI0F07909p (221 aa)
     
  0.993
XP_500756.1
YALI0B11352p (1111 aa)
   
  0.979
XP_500136.2
YALI0A16588p (1632 aa)
     
  0.971
CWC2
YALI0F29073p; Involved in the first step of pre-mRNA splicing. Required for cell growth and cell cycle control. Plays a role in the levels of the U1, U4, U5 and U6 snRNAs and the maintenance of the U4/U6 snRNA complex. May provide the link between the "nineteen complex" NTC spliceosome protein complex and the spliceosome through the U6 snRNA. Associates predominantly with U6 snRNAs in assembled active spliceosomes. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre- mRNA intron near the 5’ splice site during the activation and catalytic phases of the s [...] (382 aa)
   
  0.939
XP_503327.1
YALI0D26664p (194 aa)
     
  0.894
XP_500940.1
YALI0B15642p (731 aa)
     
  0.884
XP_500667.1
YALI0B09053p (1077 aa)
     
  0.884
XP_501420.1
YALI0C03982p (137 aa)
     
  0.868
XP_500029.1
YALI0A13101p (867 aa)
     
  0.859
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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