STRINGSTRING
XP_499998.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_499998.1" - YALI0A12001p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_499998.1YALI0A12001p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1345 aa)    
Predicted Functional Partners:
XP_500406.1
YALI0B01980p (444 aa)
     
 
  0.743
DIM1
YALI0E00770p; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3’-end of 18S rRNA in the 40S particle (317 aa)
     
  0.666
XP_504504.1
YALI0E28371p (867 aa)
       
      0.572
XP_505570.1
YALI0F18260p (265 aa)
         
  0.554
XP_502965.1
YALI0D17996p (398 aa)
         
  0.554
XP_502224.1
YALI0C24398p (265 aa)
         
  0.554
NHP6
YALI0C11671p; DNA-binding protein that induces severe bending of DNA. Required for DNA-binding by the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. Also augments the fidelity of transcription by RNA polymerase III independently of any role in the FACT complex (By similarity) (103 aa)
         
  0.554
XP_500362.1
YALI0B00858p (265 aa)
         
  0.554
XP_502376.1
YALI0D03718p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1229 aa)
     
   
  0.531
XP_503737.1
YALI0E09493p (2186 aa)
     
 
  0.517
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (9%) [HD]