STRINGSTRING
XP_500000.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500000.1" - YALI0A12045p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500000.1YALI0A12045p; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (165 aa)    
Predicted Functional Partners:
XP_500663.1
YALI0B08965p; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (204 aa)
 
  0.999
XP_501315.1
YALI0C01111p (228 aa)
  0.995
XP_503453.1
YALI0E02288p (316 aa)
 
 
  0.924
XP_502565.1
YALI0D08250p (492 aa)
   
 
  0.883
XP_505321.1
YALI0F12199p (605 aa)
   
  0.842
XP_502488.1
YALI0D06501p (250 aa)
 
  0.789
ARO1
YALI0F12639p; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1556 aa)
         
  0.662
CAP1
YALI0E05291p; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (By similarity) (262 aa)
       
      0.577
FMN1
YALI0B01826p; Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) coenzyme (192 aa)
   
 
  0.543
XP_503737.1
YALI0E09493p (2186 aa)
   
   
  0.528
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]