STRINGSTRING
XP_500029.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500029.1" - YALI0A13101p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500029.1YALI0A13101p (867 aa)    
Predicted Functional Partners:
XP_504544.2
YALI0E29293p (170 aa)
     
  0.998
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.974
XP_500136.2
YALI0A16588p (1632 aa)
     
  0.968
XP_503283.1
YALI0D25652p (207 aa)
       
  0.956
PAB1
YALI0C00539p; Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation t [...] (629 aa)
     
  0.953
XP_505140.1
YALI0F07909p (221 aa)
     
  0.953
XP_002142994.1
YALI0A20867p (223 aa)
     
  0.953
LEA1
YALI0E30569p; Involved in pre-mRNA splicing (230 aa)
     
  0.943
XP_501450.1
YALI0C04620p (919 aa)
       
  0.941
XP_500227.1
YALI0A19030p (105 aa)
     
  0.927
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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