STRINGSTRING
XP_500103.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500103.1" - YALI0A15686p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500103.1YALI0A15686p (981 aa)    
Predicted Functional Partners:
XP_499751.1
YALI0A04345p (353 aa)
     
  0.990
XP_504253.1
YALI0E22022p (386 aa)
     
  0.986
XP_002143008.1
YALI0B07095p (413 aa)
     
  0.983
SPT5
YALI0C11561p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (980 aa)
     
  0.979
XP_502302.1
YALI0D01892p (514 aa)
     
  0.977
SPT16
YALI0D14652p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (1003 aa)
     
  0.971
POB3
YALI0D25058p; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleoso [...] (544 aa)
     
  0.971
XP_502048.1
YALI0C20339p (312 aa)
       
  0.909
XP_503653.1
YALI0E07117p; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (184 aa)
     
  0.894
XP_502915.1
YALI0D16885p (1535 aa)
     
  0.887
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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