STRINGSTRING
XP_500104.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500104.1" - YALI0A15708p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500104.1YALI0A15708p (518 aa)    
Predicted Functional Partners:
XP_500585.1
YALI0B06875p (1607 aa)
     
 
  0.780
XP_506096.1
YALI0F31449p (1137 aa)
       
 
  0.769
XP_503903.1
YALI0E13486p (485 aa)
     
 
  0.639
DBP6
YALI0B22572p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (607 aa)
     
 
  0.575
XP_504766.1
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
 
  0.526
XP_499726.1
YALI0A03509p (701 aa)
     
   
  0.526
DBP10
YALI0D24497p; ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (926 aa)
     
   
  0.516
XP_504544.2
YALI0E29293p (170 aa)
       
      0.469
XP_503266.1
YALI0D25234p (448 aa)
     
 
  0.467
XP_503601.1
YALI0E05797p (388 aa)
     
   
  0.463
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (6%) [HD]