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XP_500125.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500125.1" - YALI0A16291p in Yarrowia lipolytica
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500125.1YALI0A16291p (811 aa)    
Predicted Functional Partners:
XP_504161.1
YALI0E19767p; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1244 aa)
     
      0.526
XP_504948.1
YALI0F03454p; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (923 aa)
       
      0.525
XP_504690.1
YALI0E32542p (519 aa)
       
      0.525
XP_504380.1
YALI0E25069p (1502 aa)
       
 
  0.434
XP_505651.1
YALI0F20174p (1326 aa)
       
 
  0.433
XP_503609.1
YALI0E05973p (1279 aa)
       
 
  0.433
XP_500789.1
YALI0B12188p (1304 aa)
       
 
  0.433
XP_499981.1
YALI0A11473p (1254 aa)
       
 
  0.433
RAT1
YALI0D13750p; Possesses 5’->3’ exoribonuclease activity. Required for the processing of nuclear mRNA and rRNA precursors. May promote termination of transcription by RNA polymerase II (By similarity) (1010 aa)
     
      0.424
RAI1
YALI0E28490p; Ribonuclease that specifically degrades pre-mRNAs with a defective 5’ end cap and is part of a pre-mRNA capping quality control. Has decapping and pyrophosphohydrolase activities. Has decapping activity toward incomplete 5’ end cap mRNAs such as unmethylated 5’ end-capped RNA to release GpppN and 5’ end monophosphate RNA. Also possesses RNA 5’-pyrophosphohydrolase activity by hydrolyzing the 5’ end triphosphate to release pyrophosphates (By similarity) (349 aa)
       
      0.407
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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