STRINGSTRING
XP_500136.2 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500136.2" - YALI0A16588p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500136.2YALI0A16588p (1632 aa)    
Predicted Functional Partners:
XP_504370.1
YALI0E24827p (406 aa)
       
  0.989
XP_002142994.1
YALI0A20867p (223 aa)
       
  0.989
XP_505140.1
YALI0F07909p (221 aa)
       
  0.989
XP_502076.1
YALI0C21131p (724 aa)
     
  0.974
SUB2
YALI0A11157p; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity) (441 aa)
     
  0.971
XP_500029.1
YALI0A13101p (867 aa)
     
  0.968
XP_504544.2
YALI0E29293p (170 aa)
       
  0.914
XP_501695.1
YALI0C10824p (186 aa)
     
  0.877
XP_505962.1
YALI0F27775p (1182 aa)
     
 
  0.789
XP_500185.1
YALI0A18007p (531 aa)
     
  0.742
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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