STRINGSTRING
XP_500176.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500176.1" - YALI0A17809p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500176.1YALI0A17809p (878 aa)    
Predicted Functional Partners:
XP_500711.1
YALI0B10241p (1367 aa)
       
      0.898
XP_502573.1
YALI0D08419p (389 aa)
       
 
  0.858
XP_505248.1
YALI0F10505p (322 aa)
       
 
  0.832
SPT5
YALI0C11561p; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (By similarity) (980 aa)
     
      0.788
RRD1
YALI0B02772p; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Acts as a regulatory subunit for PP2A-like phosphatases modulating their activity or substrate specificity, probably by inducing a conformational change in the catalytic subunit, a direct target of the PPIase. Can reactivate inactive phosphatase PP2A-phosphatase methylesterase complexes (PP2Ai) in presence of ATP and Mg(2+) by dissociating the inactive form from the complex (By similarity) (432 aa)
       
 
  0.760
XP_499783.1
YALI0A05357p (322 aa)
       
 
  0.622
XP_505396.1
YALI0F14069p (319 aa)
       
 
  0.619
XP_499633.1
YALI0A00891p (463 aa)
       
 
  0.619
XP_504794.1
YALI0E34947p (341 aa)
       
 
  0.616
XP_503550.1
YALI0E04642p (378 aa)
       
 
  0.543
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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