STRINGSTRING
XP_500232.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500232.1" - YALI0A19140p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500232.1YALI0A19140p (260 aa)    
Predicted Functional Partners:
XP_505171.1
YALI0F08657p (687 aa)
     
      0.801
RRP36
YALI0B03784p; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (280 aa)
     
        0.785
XP_502877.2
YALI0D15818p (170 aa)
     
        0.763
XP_505917.1
YALI0F26653p (309 aa)
     
      0.723
NOP16
YALI0B18326p; Involved in the biogenesis of the 60S ribosomal subunit (240 aa)
     
   
  0.720
XP_503764.1
YALI0E10109p (452 aa)
     
      0.698
XP_500703.1
YALI0B10065p; Involved in nucleolar processing of pre-18S ribosomal RNA (641 aa)
     
 
  0.698
XP_504766.1
Ribosome biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (180 aa)
     
        0.696
DBP3
YALI0D09449p; ATP-dependent RNA helicase required for 60S ribosomal subunit synthesis. Involved in efficient pre-rRNA processing, predominantly at site A3, which is necessary for the normal formation of 25S and 5.8S rRNAs (By similarity) (532 aa)
     
        0.691
XP_505663.1
YALI0F20438p (277 aa)
     
      0.690
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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