STRINGSTRING
XP_500322.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500322.1" - YALI0A21197p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500322.1YALI0A21197p (694 aa)    
Predicted Functional Partners:
BFR2
YALI0D11462p (495 aa)
     
 
  0.995
XP_500703.1
YALI0B10065p; Involved in nucleolar processing of pre-18S ribosomal RNA (641 aa)
     
 
  0.995
XP_500840.1
YALI0B13442p (959 aa)
     
 
  0.994
ROK1
YALI0B21538p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (547 aa)
     
 
  0.994
XP_506048.1
90S preribosome/SSU processome component KRR1; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (359 aa)
     
 
  0.986
NOP14
YALI0F08371p; Involved in nucleolar processing of pre-18S ribosomal RNA. Has a role in the nuclear export of 40S pre-ribosomal subunit to the cytoplasm (By similarity) (832 aa)
     
 
  0.986
XP_505171.1
YALI0F08657p (687 aa)
     
 
  0.986
XP_503780.1
YALI0E10439p (360 aa)
     
 
  0.986
XP_500898.1
YALI0B14751p (1023 aa)
     
 
  0.986
XP_501932.1
YALI0C17083p (626 aa)
     
 
  0.985
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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