STRINGSTRING
XP_500347.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500347.1" - YALI0B00528p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500347.1YALI0B00528p (926 aa)    
Predicted Functional Partners:
XP_503950.1
YALI0E14663p (568 aa)
     
  0.974
XP_504334.1
YALI0E24035p (512 aa)
     
  0.965
XP_502127.1
YALI0C22231p (1394 aa)
       
  0.960
XP_501962.1
YALI0C18117p (615 aa)
       
 
  0.941
CFT1
YALI0E03982p; RNA-binding component of the cleavage and polyadenylation factor (CPF) complex, which plays a key role in polyadenylation-dependent pre-mRNA 3’-end formation and cooperates with cleavage factors including the CFIA complex and NAB4/CFIB. Involved in poly(A) site recognition. May be involved in coupling transcription termination and mRNA 3’-end formation (By similarity) (1269 aa)
     
      0.912
XP_502172.1
YALI0C23232p (799 aa)
     
      0.906
XP_504941.1
YALI0F03300p (458 aa)
       
  0.874
XP_503503.1
YALI0E03542p (788 aa)
       
 
  0.858
XP_504143.1
YALI0E19382p (644 aa)
       
  0.838
XP_501365.1
YALI0C02563p (324 aa)
       
  0.794
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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