STRINGSTRING
XP_500379.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500379.1" - YALI0B01276p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500379.1YALI0B01276p (337 aa)    
Predicted Functional Partners:
XP_503737.1
YALI0E09493p (2186 aa)
   
   
  0.700
XP_503115.1
YALI0D21530p (526 aa)
   
   
  0.529
PUS1
YALI0C12749p; Formation of pseudouridine at positions 27 and 28 in the anticodon stem and loop of transfer RNAs; at positions 34 and 36 of intron-containing precursor tRNA(Ile) and at position 35 in the intron-containing tRNA(Tyr) (528 aa)
   
   
  0.527
XP_501981.1
YALI0C18535p (445 aa)
   
 
  0.527
XP_505568.1
YALI0F18216p (443 aa)
   
   
  0.523
XP_501096.1
YALI0B19382p (1850 aa)
   
 
  0.498
XP_502295.1
YALI0D01628p (649 aa)
     
   
  0.488
ARO1
YALI0F12639p; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1556 aa)
   
   
  0.485
XP_503266.1
YALI0D25234p (448 aa)
   
   
  0.476
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
   
 
  0.473
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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