STRINGSTRING
XP_500403.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500403.1" - YALI0B01870p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500403.1YALI0B01870p (619 aa)    
Predicted Functional Partners:
DBP5
YALI0E31427p; ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. May also be involved in early transcription (By similarity) (488 aa)
     
 
  0.951
XP_502599.1
YALI0D08998p (743 aa)
     
 
  0.911
XP_502878.1
YALI0D15840p (1120 aa)
     
 
  0.858
XP_505962.1
YALI0F27775p (1182 aa)
     
 
  0.780
XP_504301.1
YALI0E23265p (366 aa)
       
 
  0.758
XP_500981.1
YALI0B16610p (319 aa)
     
 
  0.749
XP_502730.1
YALI0D12144p (865 aa)
       
 
  0.744
XP_502119.1
YALI0C22066p (882 aa)
     
 
  0.652
XP_500299.1
YALI0A20702p (528 aa)
     
 
  0.618
XP_503331.1
YALI0D26752p (1287 aa)
       
 
  0.611
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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