STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YALI0_B02178gAspartate aminotransferase. (433 aa)    
Predicted Functional Partners:
YALI0_D15840g
YALI0D15840p.
    
 
 0.990
YALI0_C03850g
YALI0C03850p.
    
 
 0.990
YALI0_B02706g
YALI0B02706p.
   
 
 0.990
YALI0_A02134g
YALI0A02134p.
    
 
 0.990
YALI0_E14190g
YALI0E14190p; Belongs to the LDH/MDH superfamily.
   
 0.984
YALI0_D16753g
Malate dehydrogenase.
   
 0.984
YALI0_D11704g
Aspartokinase.
  
 
 0.980
HPPD_YARLI
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.980
YALI0_B17336g
YALI0B17336p.
    
 0.976
YALI0_D06325g
YALI0D06325p.
   
 0.975
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.