STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPD1Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (398 aa)    
Predicted Functional Partners:
YALI0_B13970g
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.989
YALI0_C00209g
YALI0C00209p.
    
  0.964
YALI0_E18964g
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.927
YALI0_C14014g
YALI0C14014p.
    
 0.914
YALI0_F00484g
YALI0F00484p; Belongs to the FGGY kinase family.
   
 0.893
YALI0_A10362g
YALI0A10362p.
    
 0.888
YALI0_C11297g
YALI0C11297p.
  
 
 0.841
YALI0_B14531g
YALI0B14531p.
  
 
 0.840
YALI0_F19514g
YALI0F19514p; Belongs to the membrane-bound acyltransferase family.
     
 0.821
YALI0_D27016g
YALI0D27016p.
   
 
 0.817
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 284591
Other names: Y. lipolytica CLIB122, Yarrowia lipolytica CLIB122
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