STRINGSTRING
XP_500447.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500447.1" - YALI0B03014p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500447.1YALI0B03014p (530 aa)    
Predicted Functional Partners:
CWC15
YALI0F25421p; Involved in pre-mRNA splicing (215 aa)
       
  0.834
XP_501048.1
YALI0B18238p (147 aa)
     
  0.773
XP_501420.1
YALI0C03982p (137 aa)
     
  0.770
XP_503283.1
YALI0D25652p (207 aa)
       
    0.761
XP_500850.1
YALI0B13706p (522 aa)
     
  0.756
PRP46
YALI0E04697p; Involved in pre-mRNA splicing and required for cell cycle progression at G2/M (441 aa)
     
  0.749
CEF1
YALI0D20086p; Involved in pre-mRNA splicing and cell cycle control (719 aa)
     
  0.749
XP_501888.1
YALI0C16005p (197 aa)
     
  0.735
PRP45
YALI0C11715p; Involved in pre-mRNA splicing (568 aa)
     
    0.651
XP_500537.1
YALI0B05632p (519 aa)
     
  0.650
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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