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ROT1 protein (Yarrowia lipolytica) - STRING interaction network
"ROT1" - YALI0B03652p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROT1YALI0B03652p; Required for normal levels of the cell wall 1,6-beta- glucan. Involved in a protein folding machinery chaperoning proteins acting in various physiological processes including cell wall synthesis and lysis of autophagic bodies (By similarity) (248 aa)    
Predicted Functional Partners:
XP_502922.1
YALI0D17028p (542 aa)
           
  0.780
BIG1
YALI0C22187p; Required for normal beta-1,6-glucan synthesis (332 aa)
       
 
  0.499
XP_500574.1
YALI0B06600p (921 aa)
       
 
  0.480
XP_504147.1
YALI0E19470p (204 aa)
           
  0.432
XP_501771.1
YALI0C12661p (1470 aa)
       
 
  0.405
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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