STRINGSTRING
XP_500555.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500555.1" - YALI0B06094p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500555.1YALI0B06094p (833 aa)    
Predicted Functional Partners:
SEC23
YALI0E16995p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) (758 aa)
     
 
  0.589
XP_504903.1
YALI0F02387p (1906 aa)
     
 
  0.574
SEC24
YALI0F05324p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) (934 aa)
     
 
  0.571
XP_503926.1
YALI0E14036p (906 aa)
     
 
  0.562
SEC31
YALI0E30635p; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) (1184 aa)
     
 
  0.562
SEC22
YALI0D21956p; Required for transport from the ER to the Golgi complex (213 aa)
     
    0.561
XP_502561.1
YALI0D08162p (202 aa)
       
    0.555
XP_503480.1
YALI0E03014p (377 aa)
     
 
    0.549
BOS1
YALI0F31669p; SNARE required for protein transport between the ER and the Golgi complex (226 aa)
     
 
    0.539
XP_503201.1
YALI0D23705p (750 aa)
     
 
  0.452
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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