STRINGSTRING
XP_500585.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500585.1" - YALI0B06875p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500585.1YALI0B06875p (1607 aa)    
Predicted Functional Partners:
XP_506096.1
YALI0F31449p (1137 aa)
     
 
  0.902
XP_505532.1
YALI0F17358p (653 aa)
     
      0.866
XP_499726.1
YALI0A03509p (701 aa)
     
 
  0.838
XP_500726.1
YALI0B10560p (609 aa)
     
      0.833
XP_500104.1
YALI0A15708p (518 aa)
     
 
  0.780
UTP10
YALI0E29506p; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (1635 aa)
     
   
  0.702
HAS1
YALI0E01782p; ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA (605 aa)
     
 
  0.693
DBP4
YALI0A20328p; ATP-dependent RNA helicase required for ribosome biogenesis. Involved in the release of U14 snoRNA in pre-ribosomal complexes. Required for pre-rRNA cleavage at site A2 (By similarity) (740 aa)
     
 
  0.662
XP_503903.1
YALI0E13486p (485 aa)
     
      0.630
XP_500372.1
YALI0B01078p (906 aa)
     
   
  0.583
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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