STRINGSTRING
XP_500586.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500586.1" - YALI0B06897p in Yarrowia lipolytica
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500586.1YALI0B06897p (649 aa)    
Predicted Functional Partners:
XP_500756.1
YALI0B11352p (1111 aa)
     
  0.818
XP_503737.1
YALI0E09493p (2186 aa)
     
 
  0.778
XP_504361.1
YALI0E24629p (1057 aa)
     
  0.755
XP_503990.1
YALI0E15642p (589 aa)
     
  0.724
XP_505175.1
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
     
  0.646
XP_500296.1
YALI0A20636p (888 aa)
     
 
  0.612
XP_504544.2
YALI0E29293p (170 aa)
       
  0.577
XP_503925.1
YALI0E14014p (546 aa)
   
  0.574
FEN1
YALI0F20042p; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome [...] (389 aa)
   
  0.572
XP_504276.1
YALI0E22671p (677 aa)
   
  0.572
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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