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EFG1 protein (Yarrowia lipolytica) - STRING interaction network
"EFG1" - YALI0B07161p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFG1YALI0B07161p; Involved in rRNA processing (305 aa)    
Predicted Functional Partners:
XP_505404.1
YALI0F14245p (275 aa)
     
        0.689
XP_503601.1
YALI0E05797p (388 aa)
     
        0.687
RRP36
YALI0B03784p; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (280 aa)
     
        0.675
XP_499776.1
YALI0A05181p (464 aa)
     
        0.665
XP_503764.1
YALI0E10109p (452 aa)
     
        0.652
XP_500232.1
YALI0A19140p (260 aa)
     
        0.625
XP_501952.1
YALI0C17853p (521 aa)
     
      0.603
NOP58
YALI0B00946p; Required for pre-18S rRNA processing. May bind microtubules (By similarity) (515 aa)
     
      0.574
XP_503437.1
YALI0E01936p; Involved in nucleolar processing of pre-18S ribosomal RNA (244 aa)
     
        0.561
XP_504544.2
YALI0E29293p (170 aa)
       
      0.527
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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