STRINGSTRING
XP_500602.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500602.1" - YALI0B07359p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500602.1YALI0B07359p (286 aa)    
Predicted Functional Partners:
URA6
YALI0F09339p; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP (212 aa)
       
 
  0.715
XP_503737.1
YALI0E09493p (2186 aa)
   
 
  0.691
XP_504800.2
YALI0E35156p (1820 aa)
     
  0.660
XP_503658.1
YALI0E07271p (1820 aa)
     
  0.660
XP_500338.1
YALI0B00220p (414 aa)
   
 
  0.643
XP_504391.1
YALI0E25652p (470 aa)
       
  0.638
XP_504354.1
60S ribosomal protein L31 (116 aa)
 
            0.632
XP_503458.2
YALI0E02398p (1289 aa)
   
 
  0.625
XP_504715.1
YALI0E33143p (292 aa)
   
 
  0.551
XP_503556.1
YALI0E04763p (300 aa)
   
 
  0.551
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
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