STRINGSTRING
XP_500607.1 protein (Yarrowia lipolytica) - STRING interaction network
"XP_500607.1" - YALI0B07513p in Yarrowia lipolytica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_500607.1YALI0B07513p (807 aa)    
Predicted Functional Partners:
XP_505458.1
YALI0F15477p (329 aa)
   
 
  0.947
XP_504905.1
YALI0F02431p (409 aa)
     
 
  0.940
XP_504460.1
YALI0E27269p (820 aa)
   
 
  0.905
XP_503213.1
YALI0D23969p; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1537 aa)
     
  0.876
XP_504352.1
YALI0E24431p (940 aa)
   
 
0.876
XP_506116.1
YALI0F31977p (1300 aa)
   
 
  0.865
XP_501848.1
YALI0C14960p (617 aa)
     
  0.838
XP_501909.2
YALI0C16566p; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1750 aa)
     
  0.804
XP_505752.1
YALI0F22495p; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (620 aa)
     
 
  0.784
XP_500837.1
YALI0B13376p (580 aa)
     
  0.764
Your Current Organism:
Yarrowia lipolytica
NCBI taxonomy Id: 4952
Other names: Candida lipolytica, Dipodascaceae, Mycotorula lipolytica, Y. lipolytica, Yarrowia, Yarrowia lipolytica
Server load: low (7%) [HD]